Screening, identification and validation of CCND1 and PECAM1/CD31 for predicting prognosis in renal cell carcinoma patients
AGING-US
Authors: Yang, Jian-Feng; Shi, Shen-Nan; Xu, Wen-Hao; Qiu, Yun-Hua; Zheng, Jin-Zhou; Yu, Kui; Song, Xiao-Yun; Li, Feng; Wang, Yu; Wang, Rui; Qu, Yuan-Yuan; Zhang, Hai-Liang; Zhou, Xi-Qiu
Abstract
Clear cell renal cell carcinoma (ccRCC) is one of the most common cancers worldwide. Despite intense efforts to elucidate its pathogenesis, the molecular mechanisms and genetic characteristics of this cancer remain unknown. In this study, three expression profile data sets (GSE15641, GSE16441 and GSE66270) were integrated to identify candidate genes that could elucidate functional pathways in ccRCC. Expression data from 63 ccRCC tumors and 54 normal samples were pooled and analyzed. The GSE profiles shared 379 differentially expressed genes (DEGs), including 249 upregulated genes, and 130 downregulated genes. A protein-protein interaction network (PPI) was constructed and analyzed using STRING and Cytoscape. Functional and signaling pathways of the shared DEGs with significant p values were identified. Kaplan-Meier plots of integrated expression scores were used to analyze survival outcomes. These suggested that FN1, ICAM1, CXCR4, TYROBP, EGF, CAV1, CCND1 and PECAM1/CD31 were independent prognostic factors in ccRCC. Finally, to investigate early events in renal cancer, we screened for the hub genes CCND1 and PECAM1/CD31. In summary, integrated bioinformatics analysis identified candidate DEGs and pathways in ccRCC that could improve our understanding of the causes and underlying molecular events of ccRCC. These candidate genes and pathways could be therapeutic targets for ccRCC.
Minocycline impairs TNF-alpha-induced cell fusion of M13SV1-Cre cells with MDA-MB-435-pFDR1 cells by suppressing NF-kappa B transcriptional activity and its induction of target-gene expression of fusion-relevant factors
CELL COMMUNICATION AND SIGNALING
Authors: Weiler, Julian; Dittmar, Thomas
Abstract
BackgroundTo date, several studies have confirmed that driving forces of the inflammatory tumour microenvironment trigger spontaneous cancer cell fusion. However, less is known about the underlying factors and mechanisms that facilitate inflammation-induced cell fusion of a cancer cell with a normal cell. Recently, we demonstrated that minocycline, a tetracycline antibiotic, successfully inhibited the TNF-alpha-induced fusion of MDA-MB-435 cancer cells with M13SV1 breast epithelial cells. Here, we investigated how minocycline interferes with the TNF-alpha induced signal transduction pathway.MethodsA Cre-LoxP recombination system was used to quantify the fusion of MDA-MB-435-pFDR1 cancer cells and M13SV1-Cre breast epithelial cells. The impact of minocycline on the TNF-alpha signalling pathway was determined by western blotting. The transcriptional activity of NF-kappa B was characterised by immunocytochemistry, western blot and ChIP analyses. An NF-kappa B-luciferase reporter assay was indicative of NF-kappa B activity.ResultsMinocycline treatment successfully inhibited the TNFR1-TRAF2 interaction in both cell types, while minocycline abrogated the phosphorylation of I kappa B alpha and NF-kappa B-p65 to suppress nuclear NF-kappa B and its promotor activity only in M13SV1-Cre cells, which attenuated the expression of MMP9 and ICAM1. In MDA-MB-435-pFDR1 cells, minocycline increased the activity of NF-kappa B, leading to greater nuclear accumulation of NF-kappa B-p65, thus increasing promoter activity to stimulate the expression of ICAM1. Even though TNF-alpha also activated all MAPKs (ERK1/2, p38 and JNK), minocycline differentially affected these kinases to either inhibit or stimulate their activation. Moreover, SRC activation was analysed as an upstream activator of MAPKs, but no activation by TNF-alpha was revealed. The addition of several specific inhibitors that block the activation of SRC, MAPKs, AP-1 and NF-kappa B confirmed that only NF-kappa B inhibition was successful in inhibiting the TNF-alpha-induced cell fusion process.ConclusionMinocycline is a potent inhibitor in the TNF-alpha-induced cell fusion process by targeting the NF-kappa B pathway. Thus, minocycline prevented NF-kappa B activation and nuclear translocation to abolish the target-gene expression of MMP9 and ICAM1 in M13SV1-Cre cells, resulting in reduced cell fusion frequency.