Time-restricted feeding downregulates cholesterol biosynthesis program via ROR gamma-mediated chromatin modification in porcine liver organoids
JOURNAL OF ANIMAL SCIENCE AND BIOTECHNOLOGY
Authors: Zhang, Kexin; Li, Hao; Xin, Zimeng; Li, Yanwei; Wang, Xiaolong; Hu, Yun; Liu, Haoyu; Cai, Demin
Abstract
Background Time-restricted feeding (TRF) is a dieting strategy based on nutrients availability and diurnal rhythm, shown to improve lipid metabolism efficiency. We have demonstrated previously that retinoic acid-related (RAR) orphan receptor (ROR) gamma is the primary transcription factor controlling cholesterol (CHO) biosynthesis program of animals. However, the functional role of ROR gamma in liver physiology of pigs in response to TRF has not been determined, largely due to the lack of functional models and molecular tools. In the present study, we established porcine liver organoids and subjected them to restricted nutrients supply for 10-h during the light portion of the day. Results Our results showed that TRF regimen did not alter hepatocyte physiology, including unchanged cell viability, caspase 3/7 enzyme activity and the gene signature of cell proliferation in porcine liver organoids, compared to the control group (P > 0.05). Furthermore, we found that TRF downregulated the hepatic CHO biosynthesis program at both mRNA and protein levels, along with the reduced cellular CHO content in porcine liver organoids (P < 0.05). Using unbiased bioinformatic analysis of a previous ChIP-seq data and ChIP-qPCR validation, we revealed ROR gamma as the predominant transcription factor that responded to TRF, amongst the 12 targeted nuclear receptors (NRs) (P < 0.05). This was likely through ROR gamma direct binding to the MVK gene (encoding mevalonate kinase). Finally, we showed that ROR gamma agonists and overexpression enhanced the enrichment of co-factor p300, histone marks H3K27ac and H3K4me1/2, as well as RNA polymerase II (Pol-II) at the locus of MVK, in TRF-porcine liver organoids, compared to TRF-vector control (P < 0.05). Conclusions Our findings demonstrate that TRF triggers the ROR gamma-mediated chromatin remodeling at the locus of CHO biosynthesis genes in porcine liver organoids and further improves lipid metabolism.
X chromosome dosage of histone demethylase KDWISC determines sex differences in adiposity
JOURNAL OF CLINICAL INVESTIGATION
Authors: Link, Jenny C.; Wiese, Carrie B.; Chen, Xuqi; Avetisyan, Rozeta; Ronquillo, Emilio; Ma, Feiyang; Guo, Xiuqing; Yao, Jie; Allison, Matthew; Chen, Yii-Der Ida; Rotter, Jerome, I; Moustafa, Julia S. El-Sayed; Small, Kerrin S.; Iwase, Shigeki; Pellegrini, Matteo; Vergnes, Laurent; Arnold, Arthur P.; Reue, Karen
Abstract
Males and females differ in body composition and fat distribution. Using a mouse model that segregates gonadal sex (ovaries and testes) from chromosomal sex (XX and XV), we showed that XX chromosome complement in combination with a high-fat diet led to enhanced weight gain in the presence of male or female gonads. We identified the genomic dosage of Kdm5c, an X chromosome gene that escapes X chromosome inactivation, as a determinant of the X chromosome effect on adiposity. Modulating KdmSc gene dosage in XX female mice to levels that are normally present in males resulted in reduced body weight, fat content, and food intake to a degree similar to that seen with altering the entire X chromosome dosage. In cultured preadipocytes. the levels of KOMSC histone demethylase influenced chromatin accessibility (ATAC-Seq), gene expression (RNA-Seq), and adipocyte differentiation. Both in vitro and in vivo, KdmSc dosage influenced gene expression involved in extracellular matrix remodeling, which is critical for adipocyte differentiation and adipose tissue expansion. In humans, adipose tissue KOMSC mRNA levels and KDMSC genetic variants were associated with body mass. These studies demonstrate that the sex-dependent dosage of KdmSc contributes to male/female differences in adipocyte biology and highlight X-escape genes as a critical component of female physiology.