Purpose: The aim of this study was to predict key genes and their relationships for anxiety and nociceptive sensitivity related to Comt1 genetype. Methods: The raw data of E-GEOD-20160 related anxiety and nociceptive sensitivity were obtained. Pearson correlation coefficient of interaction in PPI was calculated. Topological analysis was processed for PPI network, and genes in this network were ranked based on their degrees. Ego genes were identified and models were searching and refined. Total 1000 randomized test were processed for ego networks. The classification accuracy of each ego network was obtained in this process. Results: The interactions with genes in gene expression profiles were extracted and PPI was constructed. The PPI included 4639 genes and 43837 relationships. Differential co-expression network was constructed and 74 ego genes were obtained. Thereinto, top 5 ego genes were ADCY2, GRM8, S1PR3, ADCY6 and ANXA1. After module searching and refinement, total o 11 candidate modules were obtained, including module 14, module 51 and module 9. In addition, these 11 modules were confirmed to be with significance. Module 14 contained 10 genes, such as HRH3, DRD2 and CXCR3. Similarly, module 51 included 6 genes, such as HELZ2, NCOA3 and MED30. Conclusions: Ego-network analysis was a useful and comprehensive method for biomarkers screening. Several modules such as module 3 and module 36 were important sub-network. Potential genes in these modules including ADCYs, GNAI1, DRD2, PNOC, CCR2, DRD2, and LPAR1 might be important genes for anxiety and nociceptive sensitivity researching.