Molecular characterization of E2 glycoprotein of classical swine fever virus: adaptation and propagation in porcine kidney cells
IN VITRO CELLULAR & DEVELOPMENTAL BIOLOGY-ANIMAL
Authors: Kumar, Rakesh; Barman, Nagendra N.; Khatoon, Elina; Rajbongshi, Gitika; Deka, Nipu; Morla, Sudhir; Kumar, Sachin
Abstract
Classical swine fever virus (CSFV) is the causative agent of a highly contagious disease, hog cholera in pigs. The disease is endemic in many parts of the world, and vaccination is the only way to protect the animals from CSFV infection. The lapinized vaccine strains are occasionally not protective because of animal to animal passage, inadequate vaccination strategy, suboptimal vaccine dose, and emergence of new variants. The surface glycoprotein E2 of CSFV is a major antigenic determinant and can modulate the disease outcome in pigs. In the present study, we characterized the CSFV in porcine kidney cells. The CSFV vaccine strains showed enhanced replication following 15 passages in porcine kidney cells. Nucleotide sequence analysis of the E2 protein gene of the cell culture-adapted vaccine strain of CSFV showed a mutation in putative amino acid sequences that are identical to its virulent counterpart. The study suggests the possibility of exaltation in vaccine strains following its adaptation in host cells and paves the way for a further exploration of the biology of its outbreak.
Genotyping of classical swine fever virus using high-resolution melt analysis
JOURNAL OF VIROLOGICAL METHODS
Authors: Titov, Ilya; Tsybanov, Sodnom; Malogolovkin, Alexander
Abstract
Discrimination between different field and vaccine strains of classical swine fever virus (CSFV) is crucial for meaningful disease diagnosis and epidemiological investigation. In this study, a rapid method for differentiating vaccine strains and outbreak CSFV isolates by combined RT-PCR and high-resolution melt (HRM) analysis has been developed. The assay is based on PCR amplification of short fragments from the most variable region of CSFVgene E2, followed by HRM analysis of amplicons. Real-Time PCR/HRM for CSFV detection and differentiation analysis has sensitivity comparable to RT-qPCR and genotyping resolution comparable to E2 nucleotide sequencing. This assay in one step enables rapid and sensitive identification and genotype discrimination of CSFV in field samples, and thus will be valuable for CSF outbreak response and disease control. (C) 2015 Elsevier B.V. All rights reserved.