Novel blood-based, five-gene biomarker set for the detection of colorectal cancer
CLINICAL CANCER RESEARCH
Authors: Han, Mark; Liew, Choong Tsek; Zhang, Hong Wei; Chao, Samuel; Zheng, Run; ThyeYip, Kok; Song, Zhen-Ya; Li, Hiu Ming; Geng, Xiao Ping; Zhu, Li Xin; Lin, Jian-Jiang; Marshall, K. Wayne; Liew, Choong Chin
Abstract
Purpose: We applied a unique method to identify genes expressed in whole blood that can serve as biomarkers to detect colorectal cancer (CRC). Experimental Design:Total RNA was isolated from 211 blood samples (110 non-CRC, 101 CRC). Microarray and quantitative real-time PCR were used for biomarker screening and validation, respectively. Results: From a set of 31 RNA samples (16 CRC, 15 controls), we selected 37 genes from analyzed microarray data that differed significantly between CRC samples and controls (P < 0.05). We tested these genes with a second set of 115 samples (58 CRC, 57 controls) using quantitative real-time PCR, validating 17 genes as differentially expressed. Five of these genes were selected for logistic regression analysis, of which two were the most up-regulated (CDA and MGC20553) and three were the most down-regulated (BANK1, BCNP1, and MS4A1) in CRC patients. Logit (P) of the five-gene panel had an area under the curve of 0.88 (95% confidence interval, 0.81-0.94). At a cutoff of logit (P) >+0.5 as disease (high risk), <-0.5 as control (low risk), and in between as an intermediate zone, the five-gene biomarker combination yielded a sensitivity of 94% (47 of 50) and a specificity of 77% (33 of 43). The intermediate zone contained 22 samples. We validated the predictive power of these five genes with a novel third set of 92 samples, correctly identifying 88% (30 of 34) of CRC samples and 64% (27 of 42) of non-CRC samples. The intermediate zone contained 16 samples. Conclusion: Our results indicate that the five-gene biomarker panel can be used as a novel blood-based test for CRC.
Noncanonical immunomodulatory activity of complement regulator C4BP(beta-) limits the development of lupus nephritis
KIDNEY INTERNATIONAL
Authors: Luque, Ana; Serrano, Inmaculada; Ripoll, Elia; Malta, Catarina; Goma, Montserrat; Blom, Anna M.; Grinyo, Josep M.; Rodriguez de Cordoba, Santiago; Torras, Joan; Aran, Josep M.
Abstract
Lupus nephritis is a chronic autoimmune-inflammatory condition that can lead to end-stage kidney disease. Presently available immunosuppressive treatments for lupus nephritis are suboptimal and can induce significant side effects. Recently, we characterized a novel immunomodulatory activity of the minor isoform of the classical pathway complement inhibitor, C4BP(beta-). We show here that C4BP(beta-) treatment prevented the development of proteinuria and albuminuria, decreased significantly the formation of anti-dsDNA antibodies and, locally, mitigated renal glomerular IgG and C3 deposition and generation of apoptotic cells. There was a consequent histological improvement and increased survival in lupus-prone mice. The therapeutic efficacy of C4BP(beta-) was analogous to that of the broad-acting immunosuppressant cyclophosphamide. Remarkably, a comparative transcriptional profiling analysis revealed that the kidney gene expression signature resulting from C4BP(beta-) treatment turned out to be 10 times smaller than that induced by cyclophosphamide treatment. C4BP(beta-) immunomodulation induced significant downregulation of transcripts relevant to lupus nephritis indicating immunopathogenic cell infiltration, including activated T cells (Lat), B cells (Cd19, Ms4a1, Tnfrsf13c), inflammatory phagocytes (Irf7) and neutrophils (Prtn3, S100a8, S100a9). Furthermore, cytokine profiling and immunohistochemistry confirmed that C4BP(beta-), through systemic and local CXCL13 downregulation, was able to prevent ectopic lymphoid structures neogenesis in aged mice with lupus nephritis. Thus, due to its anti-inflammatory and immunomodulatory activities and high specificity, C4BP(beta-) could be considered for further clinical development in patients with systemic lupus erythematosus.