Evaluation of candidate reference genes for investigation of the uterine tissue and corpus luteum of pigs on day 6 after artificial insemination
ANIMAL REPRODUCTION SCIENCE
Authors: Okino, Cintia Hiromi; Guaratini Ibelli, Adriana Mercia; Brentano, Liana; Zanella, Ricardo; Marques, Mariana Groke
Abstract
Housekeeping genes (HKG) are genes necessary for the maintenance of basal cellular functions, regardless of the specific roles within a tissue. It, therefore, is expected that these genes will maintain a relatively constant expression profile when there are varying physiological conditions. The identification of tissue specific reference genes is highly important for the normalization of gene expression profiles among different tissues. In this sow study, the objective was to identify stable reference genes in the uterine tissue and corpus luteum (CL), 6 days post-artificial insemination. The stability of ubiquitin (UBB), glyceraldehyde 3-phosphate dehydrogenase (GAPDH), DNA topoisomerase 2-beta (TOP2B), histone H3 (H3F3A) and hypoxanthine-guanine phosphoribosyltransferase 1 (HPRT1) abundances of mRNA were evaluated using the Bestkeeper technique. Briefly, total RNA was extracted for each tissue from 20 gilts (n = 20), processed by RT-qPCR and submitted to analysis using the Bestkeeper technique, which allowed for the evaluation of the consistency in abundance of mRNA for the reference genes. For all evaluated genes, the abundance of mRNA was relatively consistent in the uterine tissue, with the greatest abundance being for the GAPDH and TOP2B genes. The analysis of these genes in the CL, however, indicated there was a relatively greater variation of mRNA abundance for the various reference genes. Data suggest that UBB was the reference gene with the most consistent relative abundance of mRNA and that this gene could be used as a reference for corpora lutea analyses of mRNA.
H3 G34-mutant high-grade glioma
BRAIN TUMOR PATHOLOGY
Authors: Lim, Ka Young; Won, Jae Kyung; Park, Chul-Kee; Kim, Seung-Ki; Choi, Seung Hong; Kim, Taemin; Yun, Hongseok; Park, Sung-Hye
Abstract
H3F3AG34 (H3.3G34)-mutant high-grade gliomas (HGG) are rare, and newly recognized infiltrating gliomas of the cerebral hemisphere. Here, we report the clinicopathological and molecular characteristics of fourH3.3G34-mutant gliomas in terms of its biological behavior compared to those of glioblastomas (GBMs) andH3 K27M-mutant diffuse midline gliomas (DMGs) of our hospital. The median age of the four patients with H3.3 G34 HGG was 44.5 years (14-66 years). Three patients had tumors in the cerebral hemisphere, whereas one patient had synchronous double tumors in the cerebral hemisphere and posterior fossa. All these tumors were high-grade glioma, but neither microvascular proliferation nor necrosis. They displayed uniform genetic and epigenetic signatures;ATRX-mutant,MGMTpromoter-methylated, Olig2-negative, butIDH- andTERT promoter-wildtype. The median survival rate of H3.3 G34-mutant HGGs,IDH-was 23.5 months. In conclusion,H3.3 G34-mutant gliomas were unique HGGs with uniform genetic and epigenetic abnormalities, which suggested a single phylogenic origin. The median survival ofH3.3 G34-mutant HGGs was better than those of IDH-wildtype GBMs andH3 K27M-mutantDMGs, but worse than that ofIDH-mutant GBM. The tumor-infiltrating area and resectability may be the crucial parameters for the prognosis of the patients.