Fusarium fujikuroi species complex in Brazilian rice: Unveiling increased phylogenetic diversity and toxigenic potential
INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY
Authors: Nicolli, Camila P.; Haidukowski, Miriam; Susca, Antonia; Gomes, Larissa B.; Logrieco, Antonio; Stea, Gaetano; Del Ponte, Emerson M.; Moretti, Antonio; Pfenning, Ludwig H.
Abstract
Fusarium fujikuroi species complex (FFSC) species are commonly encountered infecting rice, but knowledge of the diversity and toxigenic potential of the species is lacking in Brazil, the largest rice-producing country outside Asia. One hundred FFSC isolates obtained from national rice were identified using morphology and phylogeny of TEF, CAL and TUB genes. Eight previously known and one novel Fusarium species were identified. Three species accounted for around 60% of the strains: F. fujikuroi (n = 23), F. proliferatum (n = 22) and F. verticillioides (n = 16). The less frequent species were F. volatile (n = 8), F. anthophilum (n = 6), F. pseudocircinatum (n = 4), F. sterilihyphosum (n = 2) and F. begoniae (n = 1). The novel Fusarium species was represented by 18 isolates. All species produced at least one of the analyzed mycotoxins [beauvericin (BEA), fumonisins (FBs), moniliformin (MON) and enniatins (ENNs)]. BEA was produced by all species but F. verticillioides. The FBs (mainly FB1) were produced mostly by F. fujikuroi, F. proliferatum and F. verticillioides. F. begoniae and F. verticillioides did not produce ENNs and F. sterilihyphosum and F. begoniae did not produce MON, while the other species produced MON and ENNs. Our results add new knowledge of the diversity, geographical distribution and host range of FFSC species.
Combined genome-wide association study and transcriptome analysis reveal candidate genes for resistance toFusariumear rot in maize
JOURNAL OF INTEGRATIVE PLANT BIOLOGY
Authors: Yao, Lishan; Li, Yanmei; Ma, Chuanyu; Tong, Lixiu; Du, Feili; Xu, Mingliang
Abstract
Fusariumear rot, caused byFusarium verticillioides, is a devastating fungal disease in maize that reduces yield and quality; moreover,F. verticillioidesproduces fumonisin mycotoxins, which pose serious threats to human and animal health. Here, we performed a genome-wide association study (GWAS) under three environmental conditions and identified 34 single-nucleotide polymorphisms (SNPs) that were significantly associated withFusariumear rot resistance. With reference to the maize B73 genome, 69 genes that overlapped with or were adjacent to the significant SNPs were identified as potential resistance genes toFusariumear rot. Comparing transcriptomes of the most resistant and most susceptible lines during the very early response toFusariumear rot, we detected many differentially expressed genes enriched for pathways related to plant immune responses, such as plant hormone signal transduction, phenylpropanoid biosynthesis, and cytochrome P450 metabolism. More than one-fourth of the potential resistance genes detected in the GWAS were differentially expressed in the transcriptome analysis, which allowed us to predict numbers of candidate genes for maize resistance to ear rot, including genes related to plant hormones, a MAP kinase, a PR5-like receptor kinase, and heat shock proteins. We propose that maize plants initiate early immune responses toFusariumear rot mainly by regulating the growth-defense balance and promoting biosynthesis of defense compounds.