Turbulent mixing and vertical nitrate flux induced by the semidiurnal internal tides in the southern Yellow Sea
CONTINENTAL SHELF RESEARCH
Authors: Xu, Pengzhao; Yang, Wei; Zhu, Baisu; Wei, Hao; Zhao, Liang; Nie, Hongtao
Abstract
Based on mooring observations carried out in the southern Yellow Sea during late summer 2017, this study focuses on the characteristics of the internal tide-induced turbulent mixing and the influences on the vertical transport of nitrates. We observe clear semidiurnal pycnocline displacements with an amplitude of similar to 3.5 m during 25 h. The baroclinic velocity and velocity shear are mainly controlled by the low-mode semidiurnal internal tide. The turbulence profiling measurements reveal that the measured turbulent kinetic energy dissipation rates epsilon are largely enhanced at the thermocline (epsilon similar to 2.0 x 10(-8) Wkg(-1)) where the maximum displacements occur. The depth of the enhanced epsilon and velocity shear coincide with each other which all follow the displacements of isopycnals induced by the internal tide, indicating the role of local velocity shear in generating the strong turbulence. Further analysis shows that the observed interior e is in good agreement with the MacKinnon-Gregg parametrization model which is formulated based on the wave-wave interaction theory. The strong turbulence has induced large vertical turbulent diffusivity (K-rho similar to 1.0 x 10(-5) m(2) s(-1)) in the nitracline. The estimated vertical nitrate fluxes across the nitracline are 0.07-0.44 mmolNm(-2) d(-1). Considering the fact that the temporal variation of vertical nitrate fluxes is mainly determined by the trend of K-rho, our results suggest that the internal tides which have generated large nitracline K-rho may play an important role in transporting nitrates upward, supporting the growth of phytoplankton in the summer subsurface chlorophyll maximum zone at least near our measurement location where internal tides may prevail.
Identification and characterization of a new strain of nervous necrosis virus isolated from pearl gentian grouper (Epinephelus lanceolatus x Epinephelus fuscoguttatus) in China
AQUACULTURE
Authors: Xing, Jing; Zhang, Zhiqi; Sheng, Xiuzhen; Tang, Xiaoqian; Chi, Heng; Zhan, Wenbin
Abstract
Viral nervous necrosis (VNN), caused by nervous necrosis virus (NNV), is a worldwide disease that severely imperils many kinds of marine and freshwater fish. In this study, a NNV strain CNPgg2018 isolated from pearl gentian grouper (Epinephelus lanceolatus male x Epinephelus fuscoguttatu female) juveniles was identified and characterized by histopathology examination, transmission electron microscopic (TEM), reverse transcription-polymerase chain reaction (RT-PCR), virus culture, phylogenetic analysis and experimental infection. The results showed that the diseased fish exhibited symptoms with loss of appetite, darkened body and abnormal swimming behavior. Histopathological examination revealed widespread diffuse vacuolation degeneration appeared in the brain, retina and peripheral nerve tissues. TEM observation showed that numerous virions with a diameter of about 25 nm scattered around the retinal vacuolation. Significant cytopathic effects (CPE) were observed in striped snakehead (SSN-1) and grouper brain (GB) cell lines, not in Chinook salmon embryo (CHSE-214), epithelioma papillosum cyprini (EPC) and fat-head minnow (FHM) cell lines after inoculation of pathological tissue homogenates. RT-PCR and phylogenetic tree analysis indicated that CNPgg2018 was a member of NNV with highly homology to RGNNV genotype. Besides, both monomer and tripolymer forms of capsid protein were detected through structural polypeptide analysis and three-dimensional model prediction. Infection experiment demonstrated that CNPgg2018 was virulent to pearl gentian grouper juvenile with a LD50 of 1.0 x 10(6.1) TCID50/fish. In conclusion, we investigated a natural disease in pearl gentian grouper and confirmed that the pathogen was NNV. The results of this study provide new insights into the current research on the biology, ecology and host range of NNV.