Are We There Yet ? Applying Thermodynamic and Kinetic Profiling on Embryonic Ectoderm Development (EED) Hit-to-Lead Program
JOURNAL OF MEDICINAL CHEMISTRY
Authors: Wang, Ying; Edalji, Rohinton P.; Panchal, Sanjay C.; Sun, Chaohong; Djuric, Stevan W.; Vasudevan, Anil
Abstract
It is advocated that kinetic and thermodynamic profiling of bioactive compounds should be incorporated and utilized as complementary tools for hit and lead optimizations in drug discovery. To assess their applications in the EED hit-to-lead optimization process, large amount of thermodynamic and kinetic data were collected and analyzed via isothermal titration calorimetry (ITC) and surface plasmon resonance (SPR), respectively. Slower dissociation rates (k(off)) of the lead compounds were observed as the program progressed. Analysis of the kinetic data indicated that compound cellular activity correlated with both K-i; and k(off). Our analysis revealed that ITC data should be interpreted in the context of chiral purity of the compounds. The thermodynamic signatures of the EED aminopyrrolidine compounds were found to be mainly enthalpy driven with improved enthalpic contributions as the program progressed. Our study also demonstrated that significant challenges still exist in utilizing kinetic and thermodynamic parameters for hit selection.
Zinc Absorption and Endogenous Fecal Zinc Losses in Bangladeshi Toddlers at Risk for Environmental Enteric Dysfunction
JOURNAL OF PEDIATRIC GASTROENTEROLOGY AND NUTRITION
Authors: Mondal, Prasenjit; Long, Julie M.; Westcott, Jamie E.; Islam, M. Munirul; Ahmed, Monday; Mahfuz, Mustafa; Ahmed, Tahmeed; Miller, Leland, V; Krebs, Nancy F.
Abstract
Objectives: Environmental enteric dysfunction (EED) impairs zinc absorption from food, and zinc deficiency may contribute to the poor growth associated with EED. We examined zinc absorption from a standardized aqueous zinc dose, and habitual daily endogenous fecal zinc excretion (EFZ) and compared these outcomes between children grouped by the lactulose to mannitol ratio (L:M). Methods: Bangladeshi toddlers (18-24 months) with low (<0.09) and high (>= 0.09) L:M were administered isotope-labeled 3 mg aqueous zinc in the fasted state. Fractional absorption of zinc (FAZ) and EFZ were measured by dual stable isotope tracer method and an isotope dilution method, respectively. Secondary aims included examining relationships of biomarkers of systemic and intestinal inflammation and gut function with FAZ and EFZ. Results: Forty children completed the study; nearly all had evidence of EED. Nodifferences in zinc homeostasis measurements (mean +/- SD) were observed between high and low L:M groups: FAZ was 0.38 +/- 0.19 and 0.31 +/- 0.19, respectively; both figures were within estimated reference range. Means of EFZ were 0.73 +/- 0.27 and 0.76 +/- 0.20 mg/day for high and low L:M, respectively, and were 10% to 15% above estimated reference range. Regression analyses indicated that biomarkers of systemic inflammation were directly associated with increasing FAZ, consistent with increased gut permeability. Biomarkers of intestinal inflammation were negatively associated with EFZ, consistent with low-zinc intake and chronic deficiency. Conclusions: In these children at risk of EED, endogenous zinc losses were not markedly increased. Results suggest that efforts to improve zinc status in EED should focus on substantially improving zinc intakes.