Clathrin heavy and light chain isoforms originated by independent mechanisms of gene duplication during chordate evolution
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA
Authors: Wakeham, DE; Abi-Rached, L; Towler, MC; Wilbur, JD; Parham, P; Brodsky, FM
Abstract
In humans, there are two isoforms each of clathrin heavy chain (CHC17 and CHC22) and light chain (LCa and LCb) subunits, all encoded by separate genes. CHC17 forms the ubiquitous clathrin-coated vesicles that mediate membrane traffic. CHC22 is implicated in specialized membrane organization in skeletal muscle. CHC17 is bound and regulated by LCa and LCb, whereas CHC22 does not functionally interact with either light chain. The imbalanced interactions between clathrin subunit isoforms suggest a distinct evolutionary history for each isoform pair. Phylogenetic and sequence analysis placed both heavy and light chain gene duplications during chordate evolution, 510-600 million years ago. Genes encoding CHC22 orthologues were found in several vertebrate species, with only a pseudogene present in mice. Multiple paralogons surrounding the CHC genes (CLTC and CLTD) were identified, evidence that genomic or large-scale gene duplication produced the two CHC isoforms. In contrast, clathrin light chain genes (CLTA and CLTB) apparently arose by localized duplication, within 1-11 million years of CHC gene duplication. Analysis of sequence divergence patterns suggested that structural features of the CHCs were maintained after gene duplication, but new interactions with regulatory proteins evolved for the CHC22 isoform. Thus, independent mechanisms of gene duplication expanded clathrin functions, concomitant with development of neuromuscular sophistication in chordates.
Size-dependent free vibration analysis of composite laminated Timoshenko beam based on new modified couple stress theory
ARCHIVE OF APPLIED MECHANICS
Authors: Chen, Wan Ji; Li, Xiao Peng
Abstract
A micro-scale free vibration analysis of composite laminated Timoshenko beam (CLTB) model is developed based on the new modified couple stress theory. In this theory, a new anisotropic constitutive relation is defined for modeling the CLTB. This theory uses rotation-displacement as dependent variable and contains only one material length scale parameter. Hamilton's principle is employed to derive the governing equations of motion and boundary conditions. This new model can be reduced to composite laminated Bernoulli-Euler beam model of the couple stress theory. An example analysis of free vibration of the cross-ply simply supported CLTB model is adopted, and an explicit expression of analysis solution is given. Additionally, the numerical results show that the present beam models can capture the scale effects of the natural frequencies of the micro-structure.