Molecular and flow cytometric analysis of the V beta repertoire for clonality assessment in mature TCR alpha beta T-cell proliferations
BLOOD
Authors: Langerak, AW; van den Beemd, R; Wolvers-Tettero, ILM; Boor, PPC; van Lochem, EG; Hooijkaas, H; van Dongen, JJM
Abstract
Clonality assessment through Southern blot (SB) analysis of TCRB genes or polymerase chain reaction (PCR) analysis of TCRG genes is important for diagnosing suspect mature T-cell proliferations. Clonality assessment through reverse transcription (RT)-PCR analysis of V beta -C beta transcripts and flow cytometry with a V beta antibody panel covering more than 65% of V beta domains was validated using 28 SE-defined clonal T-cell receptor (TCR)alpha beta (+) T-ALL samples and T-cell lines. Next, the diagnostic applicability of the V beta RT-PCR and flow cytometric clonality assays was studied in 47 mature T-cell proliferations. Clonal V beta -C beta RT-PCR products were detected in all 47 samples, whereas single VP domain usage was found in 31 (66%) of 47 patients. The suspect leukemic cell populations in the other 16 patients showed a complete lack of V beta monoclonal antibody reactivity that was confirmed by molecular data showing the usage of V beta gene segments not covered by the applied V beta monoclonal antibodies. Nevertheless, this could be considered indirect evidence for the "clonal" character of these cells. Remarkably, RT-PCR revealed an oligoclonal pattern in addition to dominant V beta -CP products and single V beta domain expression in many T-LGL proliferations, providing further evidence for the hypothesis raised earlier that T-LGL derive from polyclonal and oligoclonal proliferations of antigen-activated cytotoxic T cells. It is concluded that molecular V beta analysis serves to assess clonality in suspect T-cell proliferations. However, the faster and cheaper V beta antibody studies can be used as a powerful screening method for the detection of single V beta domain expression, followed by molecular studies in patients with more than 20% single V beta domain expression or large suspect T-cell populations (more than 50%-60%) without V beta reactivity, (C) 2001 by The American Society of Hematology.
ALLELES OF THE RAT T-CELL RECEPTOR BETA-CHAIN GENE-COMPLEX
IMMUNOGENETICS
Authors: BLANKENHORN, EP; SMITH, PD; WILLIAMS, CB; GUTMAN, GA
Abstract
Inbred rat strains provide a rich source of genetic diversity in immunologically relevant genes. We have characterized the alleles of one of these genes, encoding the rat T-cell receptor C-beta-1 chain, by Southern blots and nucleic acid sequencing. The Cb1 gene segments from DA and LEW rats display complex allotypic variation: both coding and noncoding regions contain multiple nucleotide substitutions. In addition, there is a polymorphic insertion of a rat repetitive LINE element 3' to the coding region. The Cb1 alleles are one part of larger Tcrb haplotypes, containing V-beta, D-beta, and J-beta elements; complete Cb1 genomic nucleotide sequences, and a partial list of the strain distribution of the two alleles, are described in this report.