Functional colour genes and signals of selection in colour-polymorphic salamanders
MOLECULAR ECOLOGY
Authors: Burgon, James D.; Vieites, David R.; Jacobs, Arne; Weidt, Stefan K.; Gunter, Helen M.; Steinfartz, Sebastian; Burgess, Karl; Mable, Barbara K.; Elmer, Kathryn R.
Abstract
Coloration has been associated with multiple biologically relevant traits that drive adaptation and diversification in many taxa. However, despite the great diversity of colour patterns present in amphibians the underlying molecular basis is largely unknown. Here, we use insight from a highly colour-variable lineage of the European fire salamander (Salamandra salamandra bernardezi) to identify functional associations with striking variation in colour morph and pattern. The three focal colour morphs-ancestral black-yellow striped, fully yellow and fully brown-differed in pattern, visible coloration and cellular composition. From population genomic analyses of up to 4,702 loci, we found no correlations of neutral population genetic structure with colour morph. However, we identified 21 loci with genotype-phenotype associations, several of which relate to known colour genes. Furthermore, we inferred response to selection at up to 142 loci between the colour morphs, again including several that relate to coloration genes. By transcriptomic analysis across all different combinations, we found 196 differentially expressed genes between yellow, brown and black skin, 63 of which are candidate genes involved in animal coloration. The concordance across different statistical approaches and 'omic data sets provide several lines of evidence for loci linked to functional differences between colour morphs, including TYR, CAMK1 and PMEL. We found little association between colour morph and the metabolomic profile of its toxic compounds from the skin secretions. Our research suggests that current ecological and evolutionary hypotheses for the origins and maintenance of these striking colour morphs may need to be revisited.
Mutated SASH1 promotes Mitf expression in a heterozygous mutated SASH1 knock-in mouse model
INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE
Authors: Xu, Zexi; Li, Yadong; Wang, Dahong; Wu, Daoqiu; Wang, Jinyun; Chen, Lian; Deng, Yinqian; Zhang, Jing; Wu, Zhixiong; Wan, Xin; Liu, Qianfan; Huang, Hai; Hu, Pingsheng; Zeng, Jiawei; Zhou, Ding'an
Abstract
The SAM and SH3 domain-containing 1 (SASH1) genes have been identified as the causal genes of dyschromatosis universalis hereditaria (DUH); these genes cause the pathological phenotypes of DUH, andSASH1variants have been shown to regulate the abnormal pigmentation phenotype in human skin in various genodermatoses. However, investigations into the mutatedSASH1gene have been limited toin vitrostudies. In the present study, to recapitulate the molecular pathological phenotypes of individuals with DUH induced bySASH1mutations, a heterozygous BALB/c mouse model, in which the humanSASH1c.1654 T>G (p. Tyr 551Asp, Y551D) mutation was knocked in was first generated. Thein vivofunctional experiments on Y551DSASH1indicated that the increased expression of microphthalmia-associated transcription factor (Mitf) was uniformly induced in the tails of heterozygous BALB/c mice, and an increased quantity of Mitf-positive epithelial cells was also detected. An increased expression of Mitf- and Mitf-positive cells was also demonstrated in the epithelial tissues of Y551D-SASH1affected individuals. In the present study, Mitf expression was also found to be increased by Y551DSASH1 in vitro. Taken together, these findings indicate that the upregulation of Mitf is the bona fide effector of the Y551D SASH1-mediated melanogenesis signaling pathwayin vivo. SASH1 may function as a scaffold molecule for the assembly of a SASH1-Mitf molecular complex to regulate Mitf expression in the cell nucleus and thus to promote the hyperpigmented phenotype in the pathogenesis of DUH and other genodermatoses related to pigment abnormalities.