Lysine methylation by the mitochondrial methyltransferase FAM173B optimizes the function of mitochondrial ATP synthase
JOURNAL OF BIOLOGICAL CHEMISTRY
Authors: Malecki, Jedrzej M.; Willemen, Hanneke L. D. M.; Pinto, Rita; Ho, Angela Y. Y.; Moen, Anders; Kjonstad, Ingrid F.; Burgering, Boudewijn M. T.; Zwartkruis, Fried; Eijkelkamp, Niels; Falnes, Pal O.
Abstract
Lysine methylation is an important post-translational modification that is also present on mitochondrial proteins, but the mitochondrial lysine-specific methyltransferases (KMTs) responsible for modification are in most cases unknown. Here, we set out to determine the function of human family with sequence similarity 173 member B (FAM173B), a mitochondrial methyltransferase (MTase) reported to promote chronic pain. Using bioinformatics analyses and biochemical assays, we found that FAM173B contains an atypical, noncleavable mitochondrial targeting sequence responsible for its localization to mitochondria. Interestingly, CRISPR/Cas9-mediated KO of FAM173B in mammalian cells abrogated trimethylation of Lys-43 in ATP synthase c-subunit (ATPSc), a modification previously reported as ubiquitous among metazoans. ATPSc methylation was restored by complementing the KO cells with enzymatically active human FAM173B or with a putative FAM173B orthologue from the nematode Caenorhabditis elegans. Interestingly, lack of Lys-43 methylation caused aberrant incorporation of ATPSc into the ATP synthase complex and resulted in decreased ATP-generating ability of the complex, as well as decreased mitochondrial respiration. In summary, we have identified FAM173B as the long-sought KMT responsible for methylation of ATPSc, a key protein in cellular ATP production, and have demonstrated functional significance of ATPSc methylation. We suggest renaming FAM173B to ATPSc-KMT (gene name ATPSCKMT).
Genome-wide association study meta-analysis of chronic widespread pain: evidence for involvement of the 5p15.2 region
ANNALS OF THE RHEUMATIC DISEASES
Authors: Peters, Marjolein J.; Broer, Linda; Willemen, Hanneke L. D. M.; Eiriksdottir, Gudny; Hocking, Lynne J.; Holliday, Kate L.; Horan, Michael A.; Meulenbelt, Ingrid; Neogi, Tuhina; Popham, Maria; Schmidt, Carsten O.; Soni, Anushka; Valdes, Ana M.; Amin, Najaf; Dennison, Elaine M.; Eijkelkamp, Niels; Harris, Tamara B.; Hart, Deborah J.; Hofman, Albert; Huygen, Frank J. P. M.; Jameson, Karen A.; Jones, Gareth T.; Launer, Lenore J.; Kerkhof, Hanneke J. M.; de Kruijf, Marjolein; McBeth, John; Kloppenburg, Margreet; Ollier, William E.; Oostra, Ben; Payton, Antony; Rivadeneira, Fernando; Smith, Blair H.; Smith, Albert V.; Stolk, Lisette; Teumer, Alexander; Thomson, Wendy; Uitterlinden, Andre G.; Wang, Ke; van Wingerden, Sophie H.; Arden, Nigel K.; Cooper, Cyrus; Felson, David; Gudnason, Vilmundur; Macfarlane, Gary J.; Pendleton, Neil; Slagboom, P. Eline; Spector, Tim D.; Voelzke, Henry; Kavelaars, Annemieke; van Duijn, Cornelia M.; Williams, Frances M. K.; van Meurs, Joyce B. J.
Abstract
Background and objectives Chronic widespread pain (CWP) is a common disorder affecting similar to 10% of the general population and has an estimated heritability of 48-52%. In the first large-scale genome-wide association study (GWAS) meta-analysis, we aimed to identify common genetic variants associated with CWP. Methods We conducted a GWAS meta-analysis in 1308 female CWP cases and 5791 controls of European descent, and replicated the effects of the genetic variants with suggestive evidence for association in 1480 CWP cases and 7989 controls. Subsequently, we studied gene expression levels of the nearest genes in two chronic inflammatory pain mouse models, and examined 92 genetic variants previously described associated with pain. Results The minor C-allele of rs13361160 on chromosome 5p15.2, located upstream of chaperonin-containing-TCP1-complex-5 gene (CCT5) and downstream of FAM173B, was found to be associated with a 30% higher risk of CWP (minor allele frequency=43%; OR=1.30, 95% CI 1.19 to 1.42, p=1.2x10(-8)). Combined with the replication, we observed a slightly attenuated OR of 1.17 (95% CI 1.10 to 1.24, p=4.7x10(-7)) with moderate heterogeneity (I2=28.4%). However, in a sensitivity analysis that only allowed studies with joint-specific pain, the combined association was genome-wide significant (OR=1.23, 95% CI 1.14 to 1.32, p=3.4x10(-8), I2=0%). Expression levels of Cct5 and Fam173b in mice with inflammatory pain were higher in the lumbar spinal cord, not in the lumbar dorsal root ganglions, compared to mice without pain. None of the 92 genetic variants previously described were significantly associated with pain (p>7.7x10(-4)). Conclusions We identified a common genetic variant on chromosome 5p15.2 associated with joint-specific CWP in humans. This work suggests that CCT5 and FAM173B are promising targets in the regulation of pain.