Rhinovirus infection induces distinct transcriptome profiles in polarized human macrophages
PHYSIOLOGICAL GENOMICS
Authors: Rajput, Charu; Walsh, Megan P.; Eder, Breanna N.; Metitiri, Ediri E.; Popova, Antonia P.; Hershenson, Marc B.
Abstract
Infections with rhinovirus (RV) cause asthma exacerbations. Recent studies suggest that macrophages play a role in asthmatic airway inflammation and the innate immune response to RV infection. Macrophages exhibit phenotypes based on surface markers and gene expression. We hypothesized that macrophage polarization state alters gene expression in response to RV infection. Cells were derived from human peripheral blood derived monocytes. M1 and M2 polarization was carried out by using IFN-gamma and IL-4, respectively, and RNA was extracted for Affymetrix Human Gene ST2.1 exon arrays. Selected genes were validated by quantitative (q)PCR. Treatment of nonactivated (M0) macrophages with IFN-gamma and IL-4 induced the expression of 252 and 153 distinct genes, respectively, including previously-identified M1 and M2 markers. RV infection of M0 macrophages induced upregulation of 232 genes; pathway analysis showed significant overrepresentation of genes involved in IFN-alpha/beta signaling and cytokine signaling in the immune system. RV infection induced differential expression of 195 distinct genes in M1-like macrophages but only seven distinct genes in M2-like-polarized cells. In a secondary analysis. comparison between M0-, RV-infected, and M1-like-polarized, RV-infected macrophages revealed differential expression of 227 genes including those associated with asthma and its exacerbation. qPCR demonstrated increased expression of CCL8, CXCL10, TNFSF10, TNFSF18, IL6, NOD2, and GSDMD and reduced expression of VNN1, AGO1, and AGO2. Together, these data show that, in contrast to M2-like-polarized macrophages, gene expression of M1-like macrophages is highly regulated by RV.
FOXO3 is involved in the tumor necrosis factor-driven inflammatory response in fibroblast-like synoviocytes
LABORATORY INVESTIGATION
Authors: Brandstetter, Bernhard; Dalwigk, Karolina; Platzer, Alexander; Niederreiter, Birgit; Kartnig, Felix; Fischer, Anita; Vladimer, Gregory, I; Byrne, Ruth A.; Sevelda, Florian; Holinka, Johannes; Pap, Thomas; Steiner, Gunter; Superti-Furga, Giulio; Smolen, Josef S.; Kiener, Hans P.; Karonitsch, Thomas
Abstract
Fibroblast-like synoviocytes (FLS) are major contributors to joint inflammation in rheumatoid arthritis (RA). Forkhead box O 3 (FOXO3) perturbations in immune cells are increasingly linked to RA pathogenesis. Here, we show that FOXO3 is distinctly inactivated/phosphorylated in the FLS of rheumatoid synovitis. In vitro, stimulation of FLS with tumor necrosis factor-alpha alpha (TNF alpha) induced a rapid and sustained inactivation of FOXO3. mRNA profiling revealed that the inactivation of FOXO3 is important for the sustained pro-inflammatory interferon response to TNF alpha (CXCL9, CXCL10, CXCL11, and TNFSF18). Mechanistically, our studies demonstrate that the inactivation of FOXO3 results from TNF-induced downregulation of phosphoinositide-3-kinase-interacting protein 1 (PIK3IP1). Thus, we identified FOXO3 and its modulator PIK3IP1 as a critical regulatory circuit for the inflammatory response of the resident mesenchymal cells to TNF alpha and contribute insight into how the synovial tissue brings about chronic inflammation that is driven by TNF alpha.