Association analyses identify six new psoriasis susceptibility loci in the Chinese population
NATURE GENETICS
Authors: Sun, Liang-Dan; Cheng, Hui; Wang, Zai-Xing; Zhang, An-Ping; Wang, Pei-Guang; Xu, Jin-Hua; Zhu, Qi-Xing; Zhou, Hai-Sheng; Ellinghaus, Eva; Zhang, Fu-Ren; Pu, Xiong-Ming; Yang, Xue-Qin; Zhang, Jian-Zhong; Xu, Ai-E; Wu, Ri-Na; Xu, Li-Min; Peng, Lin; Helms, Cynthia A.; Ren, Yun-Qing; Zhang, Chi; Zhang, Shu-Mei; Nair, Rajan P.; Wang, Hong-Yan; Lin, Guo-Shu; Stuart, Philip E.; Fan, Xing; Chen, Gang; Tejasvi, Trilokraj; Li, Pan; Zhu, Jun; Li, Zhi-Ming; Ge, Hong-Mei; Weichenthal, Michael; Ye, Wen-Zheng; Zhang, Cheng; Shen, Song-Ke; Yang, Bao-Qi; Sun, Yuan-Yuan; Li, Shan-Shan; Lin, Yan; Jiang, Jian-Hua; Li, Cun-Tao; Chen, Ri-Xin; Cheng, Juan; Jiang, Xin; Zhang, Peng; Song, Wei-Min; Tang, Jin; Zhang, Hao-Qin; Sun, Li; Cui, Jing; Zhang, Li-Jun; Tang, Biao; Huang, Fei; Qin, Qian; Pei, Xiao-Ping; Zhou, Ai-Min; Shao, Li-Mei; Liu, Jian-Lan; Zhang, Feng-Yu; Du, Wei-Dong; Franke, Andre; Bowcock, Anne M.; Elder, James T.; Liu, Jian-Jun; Yang, Sen; Zhang, Xue-Jun
Abstract
We extended our previous genome-wide association study for psoriasis with a multistage replication study including 8,312 individuals with psoriasis (cases) and 12,919 controls from China as well as 3,293 cases and 4,188 controls from Germany and the United States and 254 nuclear families from the United States. We identified six new susceptibility loci associated with psoriasis in the Chinese study containing the candidate genes ERAP1, PTTG1, CSMD1, GJB2, SERPINB8 and ZNF816A (combined P < 5 x 10(-8)) and replicated one locus, 5q33.1 (TNIP1-ANXA6), previously reported (combined P = 3.8 x 10(-21)) in the European studies. Two of these loci showed evidence for association in the German study at ZNF816A and GJB2 with P = 3.6 x 10(-3) and P = 7.9 x 10(-3), respectively. ERAP1 and ZNF816A were associated with type 1 (early onset) psoriasis in the Chinese Han population (test for heterogeneity P = 6.5 x 10(-3) and P = 1.5 x 10(-3), respectively). Comparisons with the results of previous GWAS of psoriasis highlight the heterogeneity of disease susceptibility between the Chinese and European populations. Our study identifies new genetic susceptibility factors and suggests new biological pathways in psoriasis.
Loss-of-Function Mutations in SERPINB8 Linked to Exfoliative Ichthyosis with Impaired Mechanical Stability of Intercellular Adhesions
AMERICAN JOURNAL OF HUMAN GENETICS
Authors: Pigors, Manuela; Sarig, Ofer; Heinz, Lisa; Plagnol, Vincent; Fischer, Judith; Mohamad, Janan; Malchin, Natalia; Rajpopat, Shefali; Kharfi, Monia; Lestringant, Giles G.; Sprecher, Eli; Kelsell, David P.; Blaydon, Diana C.
Abstract
SERPINS comprise a large and functionally diverse family of serine protease inhibitors. Here, we report three unrelated families with lossof-function mutations in SERPINB8 in association with an autosomal-recessive form of exfoliative ichthyosis. Whole-exome sequencing of affected individuals from a consanguineous Tunisian family and a large Israeli family revealed a homozygous frameshift mutation, c.947delA (p.Lys316Serfs*90), and a nonsense mutation, c.850C>T (p.Arg284*), respectively. These two mutations are located in the last exon of SERPINB8 and, hence, would not be expected to lead to nonsense-mediated decay of the mRNA; nonetheless, both mutations are predicted to lead to loss of the reactive site loop of SERPINB8, which is crucial for forming the SERPINB8-protease complex. Using Sanger sequencing, a homozygous missense mutation, c.2T>C (p.Met1?), predicted to result in an N-terminal truncated protein, was identified in an additional family from UAE. Histological analysis of a skin biopsy from an individual homozygous for the variant p.Arg284* showed disadhesion of keratinocytes in the lower epidermal layers plus decreased SERPINB8 levels compared to control. In vitro studies utilizing siRNA-mediated knockdown of SERPINB8 in keratinocytes demonstrated that in the absence of the protein, there is a cell-cell adhesion defect, particularly when cells are subjected to mechanical stress. In addition, immunoblotting and immunostaining revealed an upregulation of desmosomal proteins. In conclusion, we report mutations in SERPINB8 that are associated with exfoliative ichthyosis and provide evidence that SERPINB8 contributes to the mechanical stability of intercellular adhesions in the epidermis.