Further evidence that D-glycerate kinase (GK) deficiency is a benign disorder
BRAIN & DEVELOPMENT
Authors: Kalim, Attia; Fitzsimons, Patricia; Till, Claudia; Fernando, Malkanthi; Mayne, Philip; Sass, Jorn Oliver; Crushell, Ellen
Abstract
D-Glyceric aciduria is caused by deficiency in D-glycerate kinase (GK) due to recessive mutations in the GLYCTK gene. GK catalyzes the conversion of D-glycerate to 2-phosphoglycerate which is an intermediary reaction in the catabolism of serine and fructose. Deficiency of GK leads to accumulation of D-glycerate, which may be detected in urine organic acid analysis. Debate exists as to whether this is a benign or disease-causing disorder as the reported phenotypes vary significantly. We report two siblings from a consanguineous Pakistani family. The index case is a 5 year old boy with severe autism and global developmental delay. His urine organic acid analysis showed markedly increased excretion of glycerate, determined as D-form by enantioselective gas chromatography. There was no oxalic aciduria. His younger sister (3 years old) is asymptomatic and developmentally normal (already bilingual). Her urine showed similar amounts of D-glycerate. Both children are homozygous for the novel mutation c.767C > G in exon 5 of the GLYCTK gene, predicted to affect the enzyme by replacing the evolutionarily conserved Proline with Arginine (P256R). Both parents are heterozygous carriers. These cases support the view that D-glycerate kinase deficiency is a benign disorder. Long term follow-up studies with a greater number of individuals may be required for further confirmation. (C) 2017 The Japanese Society of Child Neurology. Published by Elsevier B.V. All rights reserved.
D-Glycerate kinase deficiency in a neuropediatric patient
BRAIN & DEVELOPMENT
Authors: Sass, Joern Oliver; Behringer, Sidney; Fernando, Malkanthi; Cesaroni, Elisabetta; Cursio, Ida; Volpini, Alberto; Till, Claudia
Abstract
D-Glyceric aciduria (DGA) due to D-glycerate kinase deficiency (DGKD) is a rare autosomal-recessive inborn error of metabolism that is usually linked to the metabolism of fructose and serine. We describe a Moroccan patient with DGKD whose metabolic defect has been characterized by metabolite studies, sequencing of genomic DNA and by studies on the RNA level. Since birth the index patient presented with severe muscular hypotonia, joint hypermobility and tremor. Enantioselective analysis showed elevated D-glyceric acid in the urine of the patient, but not in that of his parents. DNA analysis revealed homozygosity in the GLYCTK gene for c.517G>T [p.(Val173Leu)], the first mutation reported for exon 3 of this gene, as well as for the c.530-4A>G polymorphism. RNA studies suggest that none of these sequence variants affects splicing. The mother was heterozygous for both sequence variants, the father heterozygous for the first one and homozygous for the polymorphism, which further supports that c.517G>T is the functionally relevant nucleotide change. The conservation of GLYCTK throughout evolution suggests an important biological role of this enzyme, although it is not known yet how mutations are linked to clinical features. Future studies should investigate the molecular defect in a more general way and search for additional roles of GLYCTK beyond its established role in catabolism of serine and fructose. (C) 2019 The Japanese Society of Child Neurology. Published by Elsevier B.V. All rights reserved.