Associations of glutamate decarboxylase genes with initial sensitivity and age-at-onset of alcohol dependence in the Irish Affected Sib Pair Study of Alcohol Dependence
DRUG AND ALCOHOL DEPENDENCE
Authors: Kuo, Po-Hsiu; Kalsi, Gursharan; Prescott, Carol A.; Hodgkinson, Colin A.; Goldman, David; Alexander, Jeffry; van den Oord, Edwin J.; Chen, Xiangning; Sullivan, Patrick F.; Patterson, Diana G.; Walsh, Dermot; Kendler, Kenneth S.; Riley, Brien P.
Abstract
Background: The relation of gamma-aminobutyric acid (GABA) to alcohol dependence (AD) has been widely studied. Several previous studies suggest that GABA may be involved in alcohol withdrawal, tolerance, and the symptoms that form an AD ' diagnosis. The genes coding for glutamate decarboxylase (GAD), the rate-limiting enzyme in GABA synthesis, are of potential interest for their association to ethanol consumption and AD. There are two isoforms of GAD, GAD1 and GAD2, which were reported to be associated with AD in males of Han Taiwanese (GAD1) and Russian (GAD2) ancestry. The present study examined the association of the two GAD isoforms with AD and relevant alcohol-related traits in the Irish Affected Sib Pair Study of Alcohol Dependence [Prescott, C.A., Sullivan, P.F., Myers, J.M., Patterson, D.G., Devitt, M., Halberstadt, LJ.. Walsh, D., Kendler, K.S., 2005. The Irish Affected Sib Pair Study of Alcohol Dependence: study methodology and validation of diagnosis by interview and family history. Alcohol.-Clin. Exp. Res. 29 (3) 417-429]. Methods: Participants were recruited in Ireland, including 575 independent cases who met DSM-IV AD criteria and 530 controls, screened for heavy drinking. We first conducted case-control analyses of the GAD genes with AD and, within the cases, examined associations with age at onset of AD, withdrawal symptoms, and two quantitative measures: initial sensitivity and tolerance (based on scales from the Self-Rating of the Effects of Ethanol) [Schuckit, M.A., Smith, T.L., Tipp, J.E., 1997. The self-rating of the effects of alcohol (SRE) form as a retrospective measure of the risk for alcoholism. Addiction 92, 979-988]. A total of 29 SNPs were genotyped for CAD1 and GAD2 using the Illumina GoldenGate protocols. Statistical procedures were implemented to control for false discovery rates (FDR). Results: Nine of 29 markers with minor allele frequencies less than 0.01 were removed from standard analysis; the remaining 20 markers were all in Hardy-Weinberg equilibrium. Three markers in the intronic regions of GAD1 were associated with initial sensitivity to alcohol (P = 0.002); the associations remained significant after a FOR based correction for multiple testing. In addition, one marker located 3 kb upstream of GAD1 exhibited association with age at onset of AD (P = 0.0001). Gender specific effects were observed in results of both single marker and haplotype analyses. Conclusion: We found no evidence for the association of GAD genes with AD but significant association of GAD1 with initial sensitivity and age at onset of AD. Our findings suggest that the underlying
gamma-Aminobutyric acid (GABA) metabolism in CO2 treated tomatoes
POSTHARVEST BIOLOGY AND TECHNOLOGY
Authors: Deewatthanawong, Rujira; Rowell, Peter; Watkins, Christopher B.
Abstract
gamma-Aminobutyric acid (GABA) metabolism has been investigated in breaker and light red maturation stages of 'Tricia' tomatoes exposed to air, or 10% CO2 in air during storage, at 13 degrees C for 12 d, to examine whether GABA responses to elevated CO2 differ in fruit at different maturity stages. At harvest, the GABA concentration in red fruit was about a third of that in breaker fruit. The ripening of breaker stage fruit was inhibited by CO2 to a greater extent than the red fruit as judged by hue and chroma values, but the red fruit were more sensitive to development of water soaking, pitting and decay than the breaker fruit. During storage, GABA concentrations in breaker fruit decreased during storage but were usually higher in CO2 treated than air treated fruit. GABA concentrations in red fruit increased in CO2 treated fruit, but they increased and then decreased in air treated fruit over time. When CO2 treated fruit were transferred to air, GABA concentrations declined to similar levels as those found in fruit stored in air. Although glutamate decarboxylase (GAD) activity was higher in breaker than red fruit at harvest, activities in air and CO2 treated fruit were similar. GABA transaminase (GABA-T) activity was higher in red than breaker fruit, but activity declined more in CO2 than air treated fruit. Although, CO2 treatment did not affect GAD1 expression, it resulted in higher GAD2 and GAD3 expression, and to a greater extent in breaker than red fruit. No consistent effects of high CO2 conditions on the expression of GABA-T or succinic semialdehyde dehydrogenase (SSADH) genes were found. A decline in succinic semialdehyde reductase 1 (SSR1) gene expression was found only in CO2 treated red fruit, while CO2 treatment resulted in a more rapid decrease of SSR2 expression in both breaker and red fruit. The results reveal differences in GABA metabolism in breaker and red fruit in response to CO2 treatment. (C) 2010 Elsevier B.V. All rights reserved.